Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav18A0A075B656 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav18A0A075B656 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav18A0A075B656 Gm15546-201ENSMUST00000122095 826 ntBASIC16.06■□□□□ 0.16
Trav18A0A075B656 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav18A0A075B656 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav18A0A075B656 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav18A0A075B656 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trav18A0A075B656 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav18A0A075B656 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav18A0A075B656 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav18A0A075B656 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav18A0A075B656 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav18A0A075B656 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav18A0A075B656 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav18A0A075B656 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav18A0A075B656 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav18A0A075B656 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav18A0A075B656 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav18A0A075B656 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav18A0A075B656 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav18A0A075B656 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav18A0A075B656 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav18A0A075B656 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav18A0A075B656 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav18A0A075B656 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav18A0A075B656 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav18A0A075B656 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav18A0A075B656 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
Trav18A0A075B656 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav18A0A075B656 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav18A0A075B656 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav18A0A075B656 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav18A0A075B656 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav18A0A075B656 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
Trav18A0A075B656 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16■□□□□ 0.15
Trav18A0A075B656 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav18A0A075B656 Gm9959-201ENSMUST00000068277 390 ntBASIC16■□□□□ 0.15
Trav18A0A075B656 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav18A0A075B656 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav18A0A075B656 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.99■□□□□ 0.15
Trav18A0A075B656 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav18A0A075B656 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms