Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-3A0A075B648 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav12-3A0A075B648 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Trav12-3A0A075B648 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav12-3A0A075B648 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-3A0A075B648 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-3A0A075B648 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.31□□□□□ -0.12
Trav12-3A0A075B648 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Fst-202ENSMUST00000223640 2612 ntBASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav12-3A0A075B648 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms