Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13-1A0A075B644 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Mir6236-201ENSMUST00000184437 123 ntBASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-1A0A075B644 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13-1A0A075B644 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Gm26833-201ENSMUST00000180899 440 ntBASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13-1A0A075B644 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Iqck-206ENSMUST00000208658 2891 ntBASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13-1A0A075B644 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav13-1A0A075B644 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms