Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-7-dv9A0A075B639 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-7-dv9A0A075B639 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav6-7-dv9A0A075B639 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-7-dv9A0A075B639 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.35■□□□□ 0.37
Trav6-7-dv9A0A075B639 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 AA386476-201ENSMUST00000098781 1665 ntBASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-7-dv9A0A075B639 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-7-dv9A0A075B639 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-7-dv9A0A075B639 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trav6-7-dv9A0A075B639 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-7-dv9A0A075B639 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-7-dv9A0A075B639 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.33■□□□□ 0.36
Trav6-7-dv9A0A075B639 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.33■□□□□ 0.36
Trav6-7-dv9A0A075B639 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-7-dv9A0A075B639 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-7-dv9A0A075B639 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-7-dv9A0A075B639 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-7-dv9A0A075B639 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms