Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13d-1A0A075B606 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13d-1A0A075B606 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13d-1A0A075B606 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Golph3-202ENSMUST00000226517 2359 ntBASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-1A0A075B606 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-1A0A075B606 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Gm26833-201ENSMUST00000180899 440 ntBASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-1A0A075B606 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav13d-1A0A075B606 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-1A0A075B606 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Gm18284-201ENSMUST00000172604 624 ntBASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-1A0A075B606 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-1A0A075B606 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-1A0A075B606 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav13d-1A0A075B606 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-1A0A075B606 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-1A0A075B606 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms