Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cenpu-201ENSMUST00000034045 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim63Q38HM4 Gm38012-201ENSMUST00000193022 3029 ntBASIC8.19□□□□□ -1.1
Trim63Q38HM4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim63Q38HM4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim63Q38HM4 Serpina3n-201ENSMUST00000021506 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm10790-202ENSMUST00000221285 1696 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Nedd4l-204ENSMUST00000224347 3150 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm14928-201ENSMUST00000120198 477 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm15806-201ENSMUST00000120696 955 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gprasp2-211ENSMUST00000173804 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm6222-202ENSMUST00000182143 629 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Platr10-202ENSMUST00000191479 818 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm5852-201ENSMUST00000194119 1021 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm18466-201ENSMUST00000209147 499 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm45349-201ENSMUST00000210285 1074 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 AC154431.1-201ENSMUST00000224910 880 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 AC154239.3-201ENSMUST00000226933 674 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm10020-201ENSMUST00000081993 612 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm5537-201ENSMUST00000091117 1252 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Tkt-201ENSMUST00000022529 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Zfp169-207ENSMUST00000177530 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Slc2a12-201ENSMUST00000042261 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Lpin2-204ENSMUST00000129635 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm37200-201ENSMUST00000193689 2172 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim63Q38HM4 Gm37570-201ENSMUST00000195411 3106 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.18□□□□□ -1.1
Trim63Q38HM4 Pax6-205ENSMUST00000111085 2779 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Olfr323-203ENSMUST00000214132 1916 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm12661-201ENSMUST00000118780 3335 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Rgs9-204ENSMUST00000106706 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm14231-201ENSMUST00000120090 592 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm12461-201ENSMUST00000120231 1239 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm16177-201ENSMUST00000120728 718 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm9060-201ENSMUST00000120926 805 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm14603-201ENSMUST00000121275 448 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 AV039307-201ENSMUST00000124795 1133 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm17046-201ENSMUST00000168078 850 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim63Q38HM4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm43118-201ENSMUST00000199149 775 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm3961-201ENSMUST00000204425 994 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC8.17□□□□□ -1.1
Trim63Q38HM4 Gm19963-201ENSMUST00000208413 1255 ntBASIC8.17□□□□□ -1.1
Trim63Q38HM4 AC117769.1-201ENSMUST00000224716 1120 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms