Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Ctla4-201ENSMUST00000027164 1933 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm20953-201ENSMUST00000216399 2614 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm11258-201ENSMUST00000121086 1218 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm5398-201ENSMUST00000121933 984 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm11760-201ENSMUST00000122355 796 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm13685-201ENSMUST00000122462 141 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm8865-201ENSMUST00000125697 430 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm12121-201ENSMUST00000131630 500 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm24013-201ENSMUST00000157727 99 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm17068-201ENSMUST00000163135 980 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm22461-201ENSMUST00000175272 70 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm24325-201ENSMUST00000175344 74 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm3534-201ENSMUST00000182522 1001 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm43572-201ENSMUST00000196494 519 ntTSL 2 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm43802-201ENSMUST00000197826 637 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Rpl7a-ps7-201ENSMUST00000198361 776 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm45676-201ENSMUST00000211306 715 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm4120-201ENSMUST00000220456 578 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm2915-201ENSMUST00000222565 787 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 AC163041.2-201ENSMUST00000223082 573 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 AC125350.3-202ENSMUST00000224295 457 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 AC165260.5-201ENSMUST00000224640 1247 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 AC154706.1-201ENSMUST00000225482 585 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Pdzk1ip1-201ENSMUST00000030488 1119 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Prp2-201ENSMUST00000076061 1074 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Tigit-201ENSMUST00000096065 963 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Crp-201ENSMUST00000038495 1695 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm37521-201ENSMUST00000193177 2045 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Ptprr-207ENSMUST00000155606 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Vwa3b-206ENSMUST00000169057 1499 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccdc188F6WEU2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Gm10741-201ENSMUST00000218151 1748 ntBASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Olfr452-202ENSMUST00000214465 1967 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Gm1821-201ENSMUST00000111388 685 ntBASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Gm15368-201ENSMUST00000120438 858 ntBASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Lyrm7os-201ENSMUST00000154044 928 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Gm13997-201ENSMUST00000155641 336 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Gm26046-201ENSMUST00000157312 166 ntBASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 Gm22484-201ENSMUST00000157992 306 ntBASIC10.16□□□□□ -0.78
Ccdc188F6WEU2 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms