Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm23999-201ENSMUST00000158057 104 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm37427-201ENSMUST00000192356 906 ntTSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm37144-201ENSMUST00000195445 1150 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm6855-201ENSMUST00000206307 790 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm34776-201ENSMUST00000219415 1140 ntTSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Apom-201ENSMUST00000025249 1013 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm5278-201ENSMUST00000055957 552 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Klk1b4-201ENSMUST00000077354 839 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Rpl27-ps1-201ENSMUST00000088784 408 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Tcl1-201ENSMUST00000041316 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Gm45440-201ENSMUST00000209826 1655 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Fam110c-201ENSMUST00000041133 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Pfkp-207ENSMUST00000138703 4145 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 CT009601.1-201ENSMUST00000225567 2705 ntBASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trub1Q8C0D0 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm28321-201ENSMUST00000187677 2327 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm25723-201ENSMUST00000104530 126 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm12969-201ENSMUST00000120199 1004 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm37207-201ENSMUST00000194284 296 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 AL672010.1-201ENSMUST00000215182 1246 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm5424-201ENSMUST00000053865 1240 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm26440-201ENSMUST00000082591 129 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Siglech-203ENSMUST00000121492 1655 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Clec4f-201ENSMUST00000014686 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm44741-201ENSMUST00000207503 2127 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm6351-203ENSMUST00000139828 1542 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Tia1-202ENSMUST00000095753 4477 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Gm18616-201ENSMUST00000222898 1400 ntBASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trub1Q8C0D0 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Pigq-202ENSMUST00000097368 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Cep63-211ENSMUST00000216281 1791 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 4930556L07Rik-201ENSMUST00000134422 1490 ntTSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm45757-201ENSMUST00000211835 1480 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Pilra-202ENSMUST00000110980 1371 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm24933-201ENSMUST00000103762 110 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm23252-201ENSMUST00000103776 110 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Vmn1r-ps114-201ENSMUST00000121050 1040 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm15982-201ENSMUST00000121681 554 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm15448-204ENSMUST00000153846 2145 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm26443-201ENSMUST00000179610 110 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm6008-201ENSMUST00000206542 874 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm45094-201ENSMUST00000207013 617 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC10.32□□□□□ -0.76
Trub1Q8C0D0 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm8256-202ENSMUST00000227964 828 ntBASIC10.32□□□□□ -0.76
Trub1Q8C0D0 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms