Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Tbce-201ENSMUST00000039894 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm22495-201ENSMUST00000104492 126 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm11628-201ENSMUST00000117568 171 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm13094-201ENSMUST00000117930 409 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm12461-201ENSMUST00000120231 1239 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Cd9-ps-201ENSMUST00000174687 650 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm25953-201ENSMUST00000175338 83 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm3534-201ENSMUST00000182522 1001 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm8643-201ENSMUST00000195228 625 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm29763-201ENSMUST00000205306 616 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm18204-201ENSMUST00000209835 793 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 CT025689.5-201ENSMUST00000224316 986 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 AC117769.1-201ENSMUST00000224716 1120 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 AC129217.1-201ENSMUST00000225181 642 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 AC133517.1-201ENSMUST00000225825 594 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm5424-201ENSMUST00000053865 1240 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Dmbx1-202ENSMUST00000084338 4031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.5□□□□□ -0.89
Clrn1Q8K445 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Clrn1Q8K445 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 AC166361.2-201ENSMUST00000219269 1415 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm13002-201ENSMUST00000119286 682 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm15968-201ENSMUST00000119342 1168 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm14148-201ENSMUST00000122433 1008 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm12906-201ENSMUST00000154610 441 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm26313-201ENSMUST00000157770 308 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm7251-201ENSMUST00000182661 1009 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm8234-201ENSMUST00000198523 1107 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm6855-201ENSMUST00000206307 790 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 CT030035.1-201ENSMUST00000223964 935 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm8991-201ENSMUST00000073014 1075 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Evc-203ENSMUST00000114154 3695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Six6-201ENSMUST00000021519 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Mpp2-201ENSMUST00000017458 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Trim13-202ENSMUST00000165015 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm19611-201ENSMUST00000216401 1865 ntBASIC9.49□□□□□ -0.89
Clrn1Q8K445 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC9.49□□□□□ -0.89
Clrn1Q8K445 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms