Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm9555-201ENSMUST00000200908 583 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm18561-201ENSMUST00000206027 804 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm8170-201ENSMUST00000218581 945 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC8.24□□□□□ -1.09
Hmgb3O54879 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 AC117769.1-201ENSMUST00000224716 1120 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Cdh8-205ENSMUST00000142475 3216 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Mpp2-202ENSMUST00000100398 3577 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Trpm1-202ENSMUST00000177102 2928 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Scn3b-206ENSMUST00000176185 4090 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 4930556L07Rik-201ENSMUST00000134422 1490 ntTSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Fam149b-210ENSMUST00000224721 4483 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Slc1a1-201ENSMUST00000025875 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Dgki-201ENSMUST00000042075 3028 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Dync1i1-201ENSMUST00000115554 2518 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC8.23□□□□□ -1.09
Hmgb3O54879 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Hmgb3O54879 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Rufy3-202ENSMUST00000196686 2077 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Limk2-203ENSMUST00000101642 3693 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Itga9-202ENSMUST00000124360 1935 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Zfp39-201ENSMUST00000102703 3890 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Ugt8a-201ENSMUST00000057944 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 AC153524.2-202ENSMUST00000220401 1794 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm36426-201ENSMUST00000222903 1795 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Xpnpep2-202ENSMUST00000114998 3017 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Grm3-201ENSMUST00000004076 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Hmgb3O54879 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 C6-203ENSMUST00000162350 2874 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Hmgb3O54879 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm10608-201ENSMUST00000093527 2509 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Hmgb3O54879 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 A230056P14Rik-201ENSMUST00000130189 2177 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Tmprss11d-201ENSMUST00000031175 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Pla2g5-202ENSMUST00000102511 690 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm12217-201ENSMUST00000118858 696 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm11980-201ENSMUST00000121445 986 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm12950-201ENSMUST00000121683 417 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Hmgb3O54879 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC8.23□□□□□ -1.09
Hmgb3O54879 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC8.23□□□□□ -1.09
Hmgb3O54879 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm44421-201ENSMUST00000205064 1221 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm17831-201ENSMUST00000205579 900 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm44814-201ENSMUST00000207018 434 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm19121-201ENSMUST00000215720 1022 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm9661-201ENSMUST00000221611 1122 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm6353-201ENSMUST00000223234 1051 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Hmgb3O54879 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm44070-201ENSMUST00000203389 2220 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Gm43288-201ENSMUST00000197594 2628 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gucd1-202ENSMUST00000118936 2843 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb3O54879 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC8.23□□□□□ -1.09
Hmgb3O54879 Gcom1-204ENSMUST00000166843 1521 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Hmgb3O54879 Crat-203ENSMUST00000102855 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 250.4 ms