Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 AC132833.1-202ENSMUST00000228875 1690 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 AC158779.1-201ENSMUST00000228912 3861 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trub1Q8C0D0 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trub1Q8C0D0 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trub1Q8C0D0 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Trub1Q8C0D0 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trub1Q8C0D0 Gsdme-203ENSMUST00000165099 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trub1Q8C0D0 Gm44907-201ENSMUST00000207423 1633 ntBASIC10.4□□□□□ -0.75
Trub1Q8C0D0 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trub1Q8C0D0 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trub1Q8C0D0 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Itga9-202ENSMUST00000124360 1935 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm43499-201ENSMUST00000202091 2107 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm11801-201ENSMUST00000117807 746 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm15041-201ENSMUST00000119048 756 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm13002-201ENSMUST00000119286 682 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm14148-201ENSMUST00000122433 1008 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm17090-201ENSMUST00000171768 490 ntTSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm22994-201ENSMUST00000175422 82 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm9621-201ENSMUST00000183322 1003 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Spin3-ps-201ENSMUST00000192825 770 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm19090-201ENSMUST00000218187 774 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm8615-201ENSMUST00000025307 771 ntBASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 C86187-202ENSMUST00000209497 2415 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Bcl2l14-202ENSMUST00000111960 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trub1Q8C0D0 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Eef1d-218ENSMUST00000154584 1721 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Sag-201ENSMUST00000077772 1719 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm44798-201ENSMUST00000208123 2410 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Nifk-201ENSMUST00000027626 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm24981-201ENSMUST00000104459 132 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 n-R5s175-201ENSMUST00000122599 117 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm13827-201ENSMUST00000148801 372 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm26313-201ENSMUST00000157770 308 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms