Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm25196-201ENSMUST00000180171 110 ntBASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Gm7784-201ENSMUST00000180769 989 ntBASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Igkv3-6-201ENSMUST00000196007 342 ntBASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Gm44341-201ENSMUST00000196168 138 ntBASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 AC125099.1-201ENSMUST00000197780 138 ntBASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 AC125099.2-201ENSMUST00000198228 138 ntBASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 AC161117.2-201ENSMUST00000221908 451 ntBASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 AC154528.3-201ENSMUST00000228011 679 ntBASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Gm10272-201ENSMUST00000092371 350 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Ica1l-205ENSMUST00000189776 1320 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 I830134H01Rik-202ENSMUST00000181592 2755 ntBASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Pvt1-201ENSMUST00000180432 1563 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh15Q99PJ1 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Chil1-208ENSMUST00000156873 1645 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm24335-201ENSMUST00000104211 132 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm12445-201ENSMUST00000117947 885 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm10086-201ENSMUST00000136334 354 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 2210408F21Rik-205ENSMUST00000138606 482 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm12061-201ENSMUST00000151881 479 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm17163-201ENSMUST00000152043 432 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm31373-201ENSMUST00000194403 737 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm5857-201ENSMUST00000198953 493 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Cox19-207ENSMUST00000198966 475 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Ldhc-205ENSMUST00000211784 829 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Tonsl-201ENSMUST00000078803 885 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Snora43-201ENSMUST00000082924 127 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Cel-201ENSMUST00000028161 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Clec4f-201ENSMUST00000014686 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Clnk-201ENSMUST00000169819 1700 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Clnk-202ENSMUST00000171633 1700 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Zfp383-201ENSMUST00000186475 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Snx6-204ENSMUST00000218934 1441 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm17980-201ENSMUST00000217977 2349 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm12038-201ENSMUST00000117322 207 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Lyzl1-202ENSMUST00000120837 652 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm12161-201ENSMUST00000121454 361 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm2666-201ENSMUST00000160587 891 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm2541-201ENSMUST00000161209 711 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Sstr2-202ENSMUST00000106630 1537 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh15Q99PJ1 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms