Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm13792-201ENSMUST00000121350 423 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm5257-201ENSMUST00000121823 790 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm24352-201ENSMUST00000158966 125 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm43547-201ENSMUST00000197729 328 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm2716-201ENSMUST00000212350 643 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm18119-201ENSMUST00000219972 616 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm35638-201ENSMUST00000220724 652 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm6564-201ENSMUST00000075377 619 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm17836-201ENSMUST00000191976 1302 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 AC130671.3-201ENSMUST00000227393 1897 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gm15625-201ENSMUST00000117617 1093 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gm9916-201ENSMUST00000192943 1228 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gm9771-201ENSMUST00000198267 1137 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gm45085-201ENSMUST00000209100 441 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 AC102523.2-201ENSMUST00000227813 983 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gm8615-201ENSMUST00000025307 771 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gm7823-201ENSMUST00000120761 1623 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 Adamts4-201ENSMUST00000111314 3761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 R3hcc1l-201ENSMUST00000026188 4112 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gmeb2-201ENSMUST00000049032 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 A1cf-204ENSMUST00000224564 1432 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.55□□□□□ -0.88
Clrn1Q8K445 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Clrn1Q8K445 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Aqp4-201ENSMUST00000079081 5082 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Stat1-203ENSMUST00000186057 3998 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Blnk-202ENSMUST00000117695 1701 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Vgll3-202ENSMUST00000227997 1383 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Gm42735-201ENSMUST00000201718 1646 ntBASIC9.54□□□□□ -0.88
Clrn1Q8K445 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clrn1Q8K445 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms