Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Eef1d-218ENSMUST00000154584 1721 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm24066-201ENSMUST00000104515 131 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm13413-201ENSMUST00000120953 602 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm20474-201ENSMUST00000180089 596 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm8707-201ENSMUST00000183325 980 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm7516-201ENSMUST00000186198 706 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm43610-201ENSMUST00000199117 365 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm18670-201ENSMUST00000218712 696 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm18515-201ENSMUST00000219755 797 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 AC160991.1-201ENSMUST00000224924 753 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 AC161763.1-201ENSMUST00000227063 168 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Apom-201ENSMUST00000025249 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Ccdc38-201ENSMUST00000092215 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm19611-201ENSMUST00000216401 1865 ntBASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps54Q5SPW0 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 4930511J24Rik-201ENSMUST00000223541 1528 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 CT025639.2-202ENSMUST00000225298 1630 ntBASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gm14699-201ENSMUST00000122340 228 ntBASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gm15788-202ENSMUST00000140087 751 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gm26174-201ENSMUST00000158415 219 ntBASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Rian-213ENSMUST00000182981 1219 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gm27203-201ENSMUST00000183677 307 ntBASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 CU025215.1-201ENSMUST00000222986 603 ntBASIC12.11□□□□□ -0.47
Vps54Q5SPW0 CT025603.2-201ENSMUST00000224369 484 ntBASIC12.11□□□□□ -0.47
Vps54Q5SPW0 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps54Q5SPW0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Rabep1-206ENSMUST00000177731 3167 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 CT572998.1-201ENSMUST00000219636 1557 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gm13713-201ENSMUST00000139377 703 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms