Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm11591-201ENSMUST00000120063 702 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm11537-201ENSMUST00000124865 791 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm43480-201ENSMUST00000201201 416 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 n-R5s195-201ENSMUST00000082891 119 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Brd9-201ENSMUST00000099384 2407 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Zcchc12-204ENSMUST00000115258 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Kctd19-202ENSMUST00000167294 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gnl3l-202ENSMUST00000112691 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm19611-201ENSMUST00000216401 1865 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 B020018J22Rik-201ENSMUST00000223085 3223 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Recql-203ENSMUST00000111803 3389 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm44749-201ENSMUST00000206285 1628 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm18640-201ENSMUST00000209777 2165 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Sltm-201ENSMUST00000049263 3691 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Med24-201ENSMUST00000017354 3410 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Mpp2-202ENSMUST00000100398 3577 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm16239-201ENSMUST00000160182 2635 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Pik3r3-202ENSMUST00000106490 1830 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Adcy4-202ENSMUST00000170223 3501 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm8754-201ENSMUST00000118391 520 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm11218-201ENSMUST00000121364 1214 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm16152-202ENSMUST00000143261 1189 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Mipep-ps-201ENSMUST00000177439 291 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm19087-201ENSMUST00000191430 946 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm42780-201ENSMUST00000197083 734 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm29763-201ENSMUST00000205306 616 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Olfr284-202ENSMUST00000206647 966 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm45384-201ENSMUST00000210451 277 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Olfr656-201ENSMUST00000098172 991 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm13104-201ENSMUST00000119651 1446 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Cnpy4-202ENSMUST00000110934 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Kcnj3-202ENSMUST00000112632 4068 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gpr61-201ENSMUST00000062028 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm5620-201ENSMUST00000077991 1348 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm29101-201ENSMUST00000188329 1471 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Gm43152-201ENSMUST00000202495 1638 ntBASIC8.25□□□□□ -1.09
Trim63Q38HM4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms