Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ebf3-205ENSMUST00000209578 1863 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Rims2-204ENSMUST00000226410 3685 ntBASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 AC140393.1-201ENSMUST00000227959 1581 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm10344-201ENSMUST00000193498 1419 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 AC166361.2-201ENSMUST00000219269 1415 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm9260-201ENSMUST00000199781 1380 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm6517-201ENSMUST00000121056 511 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 2310026L22Rik-201ENSMUST00000146658 400 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 BC080696-201ENSMUST00000202858 1218 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm2716-201ENSMUST00000212350 643 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 CT010505.2-201ENSMUST00000227918 998 ntBASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Mia3-202ENSMUST00000109158 2961 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trub1Q8C0D0 Gm37608-201ENSMUST00000195696 1880 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm37302-201ENSMUST00000192958 2998 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm13914-201ENSMUST00000118202 991 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm14654-201ENSMUST00000118620 447 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm13397-201ENSMUST00000119562 878 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm12453-201ENSMUST00000121981 331 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm5561-201ENSMUST00000178932 480 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm7672-201ENSMUST00000180915 872 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm2071-201ENSMUST00000193335 774 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm45349-201ENSMUST00000210285 1074 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms