Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Stat1-203ENSMUST00000186057 3998 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.17□□□□□ -0.46
Vps54Q5SPW0 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Trim13-202ENSMUST00000165015 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm12435-201ENSMUST00000118949 1016 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm5054-201ENSMUST00000119351 453 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm15798-201ENSMUST00000120082 408 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm13624-201ENSMUST00000120263 462 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 2310026L22Rik-201ENSMUST00000146658 400 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm21963-201ENSMUST00000179519 330 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm26532-201ENSMUST00000180630 690 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm18164-201ENSMUST00000213769 927 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm18166-201ENSMUST00000215557 927 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 AC161581.1-201ENSMUST00000228696 318 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Cd1d2-201ENSMUST00000041920 1243 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm43274-201ENSMUST00000202545 5000 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Cdh18-207ENSMUST00000226693 2165 ntBASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps54Q5SPW0 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm37759-201ENSMUST00000194155 3246 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm15132-201ENSMUST00000118581 652 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm13397-201ENSMUST00000119562 878 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm14633-201ENSMUST00000121152 470 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm12254-201ENSMUST00000134617 471 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm42779-201ENSMUST00000198807 406 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm30652-201ENSMUST00000199103 430 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm8618-201ENSMUST00000097570 432 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 AC117648.1-201ENSMUST00000219777 2510 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Rgs6-201ENSMUST00000101234 1368 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm44664-201ENSMUST00000206841 1786 ntBASIC12.15□□□□□ -0.46
Vps54Q5SPW0 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Vps54Q5SPW0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Vps54Q5SPW0 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps54Q5SPW0 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms