Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 AC142266.1-202ENSMUST00000227784 3733 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Cpne8-202ENSMUST00000064391 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Dbndd2-203ENSMUST00000109349 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm6881-201ENSMUST00000121811 833 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm8185-201ENSMUST00000160999 669 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm8652-201ENSMUST00000181363 964 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 Rian-213ENSMUST00000182981 1219 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm6473-201ENSMUST00000188572 1210 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Zg16-202ENSMUST00000205424 682 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 AC166344.1-202ENSMUST00000224139 234 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Zg16-201ENSMUST00000051122 636 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm43670-201ENSMUST00000199047 1767 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Gm43869-201ENSMUST00000204742 1405 ntBASIC8.29□□□□□ -1.08
Trim63Q38HM4 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Cd22-210ENSMUST00000189718 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Arhgap26-216ENSMUST00000155576 2280 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Anxa10-201ENSMUST00000034052 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm45193-201ENSMUST00000204686 1552 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm19221-201ENSMUST00000221827 1477 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm5597-201ENSMUST00000182353 1193 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm3890-201ENSMUST00000182416 207 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm2546-201ENSMUST00000182630 991 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm27203-201ENSMUST00000183677 307 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm45113-201ENSMUST00000207518 165 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm7319-201ENSMUST00000210047 778 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm9244-201ENSMUST00000056767 2129 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm5455-201ENSMUST00000058710 715 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Zfp94-202ENSMUST00000108436 2599 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 P2rx7-204ENSMUST00000121489 2576 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Armcx2-207ENSMUST00000168264 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Ggps1-201ENSMUST00000170957 4244 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm32335-201ENSMUST00000216896 2948 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 4930480K15Rik-201ENSMUST00000162121 2199 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms