Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm13857-201ENSMUST00000139645 173 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm8022-201ENSMUST00000191763 904 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm5870-201ENSMUST00000196461 282 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm5130-201ENSMUST00000210233 959 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 AC155300.1-201ENSMUST00000219134 480 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 AC158986.2-201ENSMUST00000227487 618 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm44975-201ENSMUST00000207435 1390 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm37909-201ENSMUST00000193157 2159 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm32914-201ENSMUST00000203815 2228 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm37160-201ENSMUST00000193081 1689 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Gm12397-201ENSMUST00000117674 615 ntBASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Gm8659-201ENSMUST00000120024 1084 ntBASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Gm11354-201ENSMUST00000121974 422 ntBASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Mir8111-201ENSMUST00000184463 137 ntBASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 AC124457.1-201ENSMUST00000198845 120 ntBASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Gm18499-201ENSMUST00000220808 1021 ntBASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Gm12912-201ENSMUST00000121596 1381 ntBASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Gm43625-201ENSMUST00000199177 1539 ntBASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.19□□□□□ -0.94
Sec61a2Q9JLR1 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms