Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm37759-201ENSMUST00000194155 3246 ntBASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm45330-201ENSMUST00000209681 1575 ntTSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Ccna1-201ENSMUST00000029368 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm14239-201ENSMUST00000116491 685 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm11957-201ENSMUST00000118304 779 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm12168-201ENSMUST00000119051 368 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm27956-201ENSMUST00000175604 260 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm9625-201ENSMUST00000180422 955 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm18010-201ENSMUST00000203553 202 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm10580-201ENSMUST00000097985 396 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm10582-201ENSMUST00000097987 396 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm10583-201ENSMUST00000097988 396 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trub1Q8C0D0 Gm44095-201ENSMUST00000204631 1931 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Stxbp5l-203ENSMUST00000114780 3476 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm15793-201ENSMUST00000121857 495 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm8451-201ENSMUST00000170338 447 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm3466-201ENSMUST00000181797 1192 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm5254-201ENSMUST00000188353 977 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm19798-201ENSMUST00000201502 457 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm2448-201ENSMUST00000207080 559 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm6518-201ENSMUST00000208450 342 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 AC154766.1-201ENSMUST00000226550 936 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Gm5453-201ENSMUST00000080866 447 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Mir483-201ENSMUST00000093631 73 ntBASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Ica1l-205ENSMUST00000189776 1320 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trub1Q8C0D0 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Gm6713-201ENSMUST00000216137 1446 ntBASIC10.46□□□□□ -0.74
Trub1Q8C0D0 A1cf-204ENSMUST00000224564 1432 ntBASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Gm37125-201ENSMUST00000195877 1559 ntBASIC10.46□□□□□ -0.74
Trub1Q8C0D0 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Polr3f-202ENSMUST00000110017 1632 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trub1Q8C0D0 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms