Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm4654-201ENSMUST00000183305 982 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.12□□□□□ -0.95
Lsm3P62311 Gm37141-201ENSMUST00000191938 422 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Gm37835-201ENSMUST00000193305 361 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 Gm4430-202ENSMUST00000193902 1041 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.12□□□□□ -0.95
Lsm3P62311 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.12□□□□□ -0.95
Lsm3P62311 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.12□□□□□ -0.95
Lsm3P62311 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Lsm3P62311 Gm10478-201ENSMUST00000084451 396 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 4931431C16Rik-201ENSMUST00000124643 2735 ntTSL 2 BASIC9.12□□□□□ -0.95
Lsm3P62311 Atp9a-202ENSMUST00000109175 3729 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Gm4926-201ENSMUST00000132691 1610 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Plekhb2-203ENSMUST00000156687 5176 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 G3bp2-201ENSMUST00000113127 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 Myo15b-207ENSMUST00000167507 1785 ntTSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Trappc9-201ENSMUST00000023276 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Vmn1r-ps128-201ENSMUST00000121211 1739 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 Olfr1424-202ENSMUST00000207681 1714 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC9.11□□□□□ -0.95
Lsm3P62311 Armcx2-207ENSMUST00000168264 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Brpf1-201ENSMUST00000113117 4540 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Aldh18a1-201ENSMUST00000025979 3527 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm28405-201ENSMUST00000185222 1498 ntTSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm29255-201ENSMUST00000185248 1498 ntTSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm29421-201ENSMUST00000185843 1498 ntTSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm29108-201ENSMUST00000186020 1498 ntTSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm29248-201ENSMUST00000186074 1498 ntTSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm28207-202ENSMUST00000187419 1498 ntTSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm28365-202ENSMUST00000189584 1498 ntTSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm29117-202ENSMUST00000190374 1498 ntTSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 Pan2-201ENSMUST00000005825 4445 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Zfp112-202ENSMUST00000120006 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm15041-201ENSMUST00000119048 756 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC9.11□□□□□ -0.95
Lsm3P62311 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.11□□□□□ -0.95
Lsm3P62311 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 Gm44364-201ENSMUST00000198368 141 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 Gm43758-201ENSMUST00000199500 367 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Lsm3P62311 Ect2l-203ENSMUST00000207827 2730 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 2810407A14Rik-202ENSMUST00000189929 2172 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Mpp1-201ENSMUST00000033775 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Zscan5b-201ENSMUST00000072662 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Ubxn2b-201ENSMUST00000029907 6642 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm20371-201ENSMUST00000203354 1756 ntBASIC9.11□□□□□ -0.95
Lsm3P62311 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 Timeless-203ENSMUST00000105242 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Commd2-202ENSMUST00000160959 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Lsm3P62311 Lpin1-205ENSMUST00000221297 3100 ntAPPRIS P4 TSL 5 BASIC9.11□□□□□ -0.95
Lsm3P62311 CT010575.1-201ENSMUST00000220666 2924 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Rasgrf1-203ENSMUST00000189545 4766 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC9.11□□□□□ -0.95
Lsm3P62311 Nobox-201ENSMUST00000031749 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Thrap3-203ENSMUST00000106142 2744 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lsm3P62311 Gm37178-201ENSMUST00000194962 1539 ntBASIC9.1□□□□□ -0.95
Lsm3P62311 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Lsm3P62311 Chat-201ENSMUST00000070125 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lsm3P62311 Gm44531-201ENSMUST00000208364 2000 ntBASIC9.1□□□□□ -0.95
Lsm3P62311 BC026762-201ENSMUST00000206555 2503 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms