Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Mir705-201ENSMUST00000102058 82 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Gm23908-201ENSMUST00000104599 132 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm12700-201ENSMUST00000118145 457 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx2P43241 Mir5108-201ENSMUST00000175276 85 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm7815-201ENSMUST00000196104 832 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm40604-201ENSMUST00000217765 655 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx2P43241 AC153948.2-201ENSMUST00000218112 505 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 AC164978.2-201ENSMUST00000226645 857 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Apom-201ENSMUST00000025249 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm8174-201ENSMUST00000064353 1001 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Zfp640-201ENSMUST00000071320 894 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Cdx2P43241 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Cdx2P43241 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Cdx2P43241 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Cdx2P43241 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx2P43241 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.69□□□□□ -0.86
Cdx2P43241 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.69□□□□□ -0.86
Cdx2P43241 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm25804-201ENSMUST00000122785 188 ntBASIC9.69□□□□□ -0.86
Cdx2P43241 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm15788-202ENSMUST00000140087 751 ntTSL 3 BASIC9.69□□□□□ -0.86
Cdx2P43241 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC9.69□□□□□ -0.86
Cdx2P43241 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm8203-201ENSMUST00000173192 387 ntBASIC9.69□□□□□ -0.86
Cdx2P43241 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.69□□□□□ -0.86
Cdx2P43241 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm6073-201ENSMUST00000198253 466 ntBASIC9.69□□□□□ -0.86
Cdx2P43241 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm9260-201ENSMUST00000199781 1380 ntBASIC9.69□□□□□ -0.86
Cdx2P43241 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm45780-201ENSMUST00000212089 224 ntBASIC9.69□□□□□ -0.86
Cdx2P43241 AC107851.1-201ENSMUST00000215982 417 ntTSL 2 BASIC9.69□□□□□ -0.86
Cdx2P43241 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Cdx2P43241 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Cdx2P43241 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Dbil5-201ENSMUST00000040806 581 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Tcl1-201ENSMUST00000041316 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC9.69□□□□□ -0.86
Cdx2P43241 4930470P17Rik-201ENSMUST00000062355 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Cdx2P43241 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm22982-201ENSMUST00000082613 319 ntBASIC9.69□□□□□ -0.86
Cdx2P43241 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cdx2P43241 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx2P43241 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.68□□□□□ -0.86
Cdx2P43241 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx2P43241 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cdx2P43241 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms