Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
Cdx2P43241 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Cdx2P43241 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.72□□□□□ -0.85
Cdx2P43241 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.72□□□□□ -0.85
Cdx2P43241 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Cdx2P43241 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.72□□□□□ -0.85
Cdx2P43241 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Gm42527-201ENSMUST00000198173 1480 ntBASIC9.72□□□□□ -0.85
Cdx2P43241 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.72□□□□□ -0.85
Cdx2P43241 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Cdx2P43241 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Cdx2P43241 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx2P43241 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx2P43241 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC9.71□□□□□ -0.85
Cdx2P43241 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.71□□□□□ -0.85
Cdx2P43241 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx2P43241 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx2P43241 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx2P43241 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Cdx2P43241 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx2P43241 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx2P43241 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx2P43241 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx2P43241 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx2P43241 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.85
Cdx2P43241 Gm11191-201ENSMUST00000117231 610 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Gm14676-201ENSMUST00000117722 858 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Gm13543-201ENSMUST00000121230 796 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Rpl7a-ps13-201ENSMUST00000121692 563 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Mir1896-201ENSMUST00000122641 81 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC9.71□□□□□ -0.86
Cdx2P43241 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm5652-201ENSMUST00000182336 1008 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Gm3534-201ENSMUST00000182522 1001 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm44131-201ENSMUST00000203036 394 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm44658-201ENSMUST00000207965 637 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Gm18471-201ENSMUST00000208272 452 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm10689-201ENSMUST00000098864 432 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cdx2P43241 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.71□□□□□ -0.86
Cdx2P43241 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Cdx2P43241 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm42714-201ENSMUST00000202063 1364 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.71□□□□□ -0.86
Cdx2P43241 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm28800-201ENSMUST00000186230 2243 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Zcchc9-201ENSMUST00000022121 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
Cdx2P43241 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC9.71□□□□□ -0.86
Cdx2P43241 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx2P43241 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.71□□□□□ -0.86
Cdx2P43241 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC9.7□□□□□ -0.86
Cdx2P43241 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx2P43241 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Cdx2P43241 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx2P43241 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms