Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Zfp469-202ENSMUST00000187142 3082 ntBASIC8.89□□□□□ -0.99
Cd28P31041 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cd28P31041 Gm9860-201ENSMUST00000211426 3653 ntBASIC8.89□□□□□ -0.99
Cd28P31041 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Gm42868-201ENSMUST00000199168 2697 ntBASIC8.88□□□□□ -0.99
Cd28P31041 Uqcc1-204ENSMUST00000109636 2633 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Cd28P31041 Abi2-210ENSMUST00000189980 4115 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Fam186b-201ENSMUST00000109100 3187 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Nbr1-206ENSMUST00000107213 4339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Ldlr-202ENSMUST00000213114 4318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Luzp1-207ENSMUST00000170102 7526 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Gm45193-201ENSMUST00000204686 1552 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Pla2g5-202ENSMUST00000102511 690 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Cd28P31041 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm11701-201ENSMUST00000121277 1142 ntBASIC8.88□□□□□ -0.99
Cd28P31041 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm23771-201ENSMUST00000178702 110 ntBASIC8.88□□□□□ -0.99
Cd28P31041 Gm18014-201ENSMUST00000183369 817 ntBASIC8.88□□□□□ -0.99
Cd28P31041 Gm27910-201ENSMUST00000185004 107 ntBASIC8.88□□□□□ -0.99
Cd28P31041 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC8.88□□□□□ -0.99
Cd28P31041 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Gm5363-201ENSMUST00000211927 938 ntBASIC8.88□□□□□ -0.99
Cd28P31041 AC159819.2-201ENSMUST00000216151 342 ntBASIC8.88□□□□□ -0.99
Cd28P31041 CT030166.5-201ENSMUST00000222249 420 ntBASIC8.88□□□□□ -0.99
Cd28P31041 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Cd28P31041 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm31024-201ENSMUST00000207600 2353 ntBASIC8.88□□□□□ -0.99
Cd28P31041 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm20953-201ENSMUST00000216399 2614 ntBASIC8.88□□□□□ -0.99
Cd28P31041 Gm11298-201ENSMUST00000120503 1799 ntBASIC8.88□□□□□ -0.99
Cd28P31041 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Zfp131-203ENSMUST00000223722 3109 ntAPPRIS ALT2 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC8.88□□□□□ -0.99
Cd28P31041 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Zfp30-201ENSMUST00000032803 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Olfr1221-203ENSMUST00000213404 2778 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Xpnpep2-202ENSMUST00000114998 3017 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Rnf41-202ENSMUST00000171342 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Rexo5-203ENSMUST00000106520 2492 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC8.88□□□□□ -0.99
Cd28P31041 AC116589.5-201ENSMUST00000222230 1660 ntTSL 5 BASIC8.88□□□□□ -0.99
Cd28P31041 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Cd28P31041 Kif3a-203ENSMUST00000120613 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Gm44975-201ENSMUST00000207435 1390 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Tmem19-204ENSMUST00000217887 3084 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Gm19026-201ENSMUST00000194240 4530 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Gm45330-201ENSMUST00000209681 1575 ntTSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cd28P31041 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 AC132467.2-201ENSMUST00000226306 2253 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Gm6335-201ENSMUST00000118081 1194 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Gm4909-201ENSMUST00000118749 794 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Gm7816-201ENSMUST00000119884 1194 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Gm15542-201ENSMUST00000121585 1194 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Cd28P31041 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC8.87□□□□□ -0.99
Cd28P31041 Gm43520-201ENSMUST00000197996 164 ntBASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms