Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Gm8495-201ENSMUST00000188740 694 ntBASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Gm18284-201ENSMUST00000172604 624 ntBASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.6■□□□□ 0.73
Mrpl40Q9Z2Q5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl40Q9Z2Q5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl40Q9Z2Q5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl40Q9Z2Q5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Mrpl40Q9Z2Q5 Gm43530-201ENSMUST00000195920 274 ntBASIC19.59■□□□□ 0.73
Mrpl40Q9Z2Q5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Mrpl40Q9Z2Q5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl40Q9Z2Q5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl40Q9Z2Q5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Mrpl40Q9Z2Q5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mrpl40Q9Z2Q5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.58■□□□□ 0.73
Mrpl40Q9Z2Q5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mrpl40Q9Z2Q5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.58■□□□□ 0.73
Mrpl40Q9Z2Q5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
Mrpl40Q9Z2Q5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.58■□□□□ 0.72
Mrpl40Q9Z2Q5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mrpl40Q9Z2Q5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mrpl40Q9Z2Q5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrpl40Q9Z2Q5 Golph3-202ENSMUST00000226517 2359 ntBASIC19.56■□□□□ 0.72
Mrpl40Q9Z2Q5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrpl40Q9Z2Q5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrpl40Q9Z2Q5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrpl40Q9Z2Q5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrpl40Q9Z2Q5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrpl40Q9Z2Q5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrpl40Q9Z2Q5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrpl40Q9Z2Q5 Gm12251-201ENSMUST00000117893 792 ntBASIC19.55■□□□□ 0.72
Mrpl40Q9Z2Q5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.55■□□□□ 0.72
Mrpl40Q9Z2Q5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mrpl40Q9Z2Q5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mrpl40Q9Z2Q5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.55■□□□□ 0.72
Mrpl40Q9Z2Q5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mrpl40Q9Z2Q5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Mrpl40Q9Z2Q5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.55■□□□□ 0.72
Mrpl40Q9Z2Q5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mrpl40Q9Z2Q5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Gm43173-201ENSMUST00000202246 593 ntBASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.53■□□□□ 0.72
Mrpl40Q9Z2Q5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mrpl40Q9Z2Q5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mrpl40Q9Z2Q5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mrpl40Q9Z2Q5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Mrpl40Q9Z2Q5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mrpl40Q9Z2Q5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mrpl40Q9Z2Q5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Mrpl40Q9Z2Q5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Mrpl40Q9Z2Q5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mrpl40Q9Z2Q5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mrpl40Q9Z2Q5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms