Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.43■■□□□ 1.02
Nr1h3Q9Z0Y9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.43■■□□□ 1.02
Nr1h3Q9Z0Y9 Gm37179-201ENSMUST00000194862 823 ntBASIC21.43■■□□□ 1.02
Nr1h3Q9Z0Y9 AV356131-201ENSMUST00000206201 750 ntBASIC21.43■■□□□ 1.02
Nr1h3Q9Z0Y9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Nr1h3Q9Z0Y9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Nr1h3Q9Z0Y9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nr1h3Q9Z0Y9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.42■■□□□ 1.02
Nr1h3Q9Z0Y9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.42■■□□□ 1.02
Nr1h3Q9Z0Y9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.42■■□□□ 1.02
Nr1h3Q9Z0Y9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.42■■□□□ 1.02
Nr1h3Q9Z0Y9 Gm10033-202ENSMUST00000211874 928 ntBASIC21.42■■□□□ 1.02
Nr1h3Q9Z0Y9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nr1h3Q9Z0Y9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nr1h3Q9Z0Y9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nr1h3Q9Z0Y9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Nr1h3Q9Z0Y9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h3Q9Z0Y9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1h3Q9Z0Y9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1h3Q9Z0Y9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1h3Q9Z0Y9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Nr1h3Q9Z0Y9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Nr1h3Q9Z0Y9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.4■■□□□ 1.02
Nr1h3Q9Z0Y9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1h3Q9Z0Y9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1h3Q9Z0Y9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nr1h3Q9Z0Y9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Nr1h3Q9Z0Y9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Nr1h3Q9Z0Y9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Nr1h3Q9Z0Y9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h3Q9Z0Y9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h3Q9Z0Y9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h3Q9Z0Y9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h3Q9Z0Y9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h3Q9Z0Y9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h3Q9Z0Y9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Nr1h3Q9Z0Y9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1h3Q9Z0Y9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1h3Q9Z0Y9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1h3Q9Z0Y9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1h3Q9Z0Y9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1h3Q9Z0Y9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Nr1h3Q9Z0Y9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1h3Q9Z0Y9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Gm9988-201ENSMUST00000069786 435 ntBASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h3Q9Z0Y9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h3Q9Z0Y9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.34■■□□□ 1.01
Nr1h3Q9Z0Y9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms