Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn9Q9Z0S7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn9Q9Z0S7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldn9Q9Z0S7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn9Q9Z0S7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.98■□□□□ 0.63
Cldn9Q9Z0S7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn9Q9Z0S7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.98■□□□□ 0.63
Cldn9Q9Z0S7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn9Q9Z0S7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Cldn9Q9Z0S7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.98■□□□□ 0.63
Cldn9Q9Z0S7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cldn9Q9Z0S7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn9Q9Z0S7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cldn9Q9Z0S7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn9Q9Z0S7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.97■□□□□ 0.63
Cldn9Q9Z0S7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn9Q9Z0S7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn9Q9Z0S7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn9Q9Z0S7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldn9Q9Z0S7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.97■□□□□ 0.63
Cldn9Q9Z0S7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.96■□□□□ 0.63
Cldn9Q9Z0S7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cldn9Q9Z0S7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn9Q9Z0S7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.96■□□□□ 0.63
Cldn9Q9Z0S7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn9Q9Z0S7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn9Q9Z0S7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn9Q9Z0S7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn9Q9Z0S7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn9Q9Z0S7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn9Q9Z0S7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.94■□□□□ 0.62
Cldn9Q9Z0S7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn9Q9Z0S7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Golph3-202ENSMUST00000226517 2359 ntBASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.92■□□□□ 0.62
Cldn9Q9Z0S7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn9Q9Z0S7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cldn9Q9Z0S7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms