Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn3Q9Z0G9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn3Q9Z0G9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn3Q9Z0G9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn3Q9Z0G9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn3Q9Z0G9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Cldn3Q9Z0G9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cldn3Q9Z0G9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn3Q9Z0G9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.92■□□□□ 0.78
Cldn3Q9Z0G9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn3Q9Z0G9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.92■□□□□ 0.78
Cldn3Q9Z0G9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn3Q9Z0G9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.92■□□□□ 0.78
Cldn3Q9Z0G9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn3Q9Z0G9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn3Q9Z0G9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Cldn3Q9Z0G9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cldn3Q9Z0G9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cldn3Q9Z0G9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn3Q9Z0G9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn3Q9Z0G9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn3Q9Z0G9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cldn3Q9Z0G9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cldn3Q9Z0G9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn3Q9Z0G9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn3Q9Z0G9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms