Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.51■□□□□ 0.39
AireQ9Z0E3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.5■□□□□ 0.39
AireQ9Z0E3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.5■□□□□ 0.39
AireQ9Z0E3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.5■□□□□ 0.39
AireQ9Z0E3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
AireQ9Z0E3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AireQ9Z0E3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Gm12821-201ENSMUST00000120022 600 ntBASIC17.49■□□□□ 0.39
AireQ9Z0E3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.49■□□□□ 0.39
AireQ9Z0E3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Gm27454-201ENSMUST00000185090 204 ntBASIC17.48■□□□□ 0.39
AireQ9Z0E3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AireQ9Z0E3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AireQ9Z0E3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
AireQ9Z0E3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
AireQ9Z0E3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AireQ9Z0E3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AireQ9Z0E3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AireQ9Z0E3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AireQ9Z0E3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AireQ9Z0E3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AireQ9Z0E3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
AireQ9Z0E3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AireQ9Z0E3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.46■□□□□ 0.39
AireQ9Z0E3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
AireQ9Z0E3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
AireQ9Z0E3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
AireQ9Z0E3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AireQ9Z0E3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
AireQ9Z0E3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AireQ9Z0E3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AireQ9Z0E3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AireQ9Z0E3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.45■□□□□ 0.38
AireQ9Z0E3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AireQ9Z0E3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AireQ9Z0E3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AireQ9Z0E3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AireQ9Z0E3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
AireQ9Z0E3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.44■□□□□ 0.38
AireQ9Z0E3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AireQ9Z0E3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AireQ9Z0E3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.44■□□□□ 0.38
AireQ9Z0E3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
AireQ9Z0E3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AireQ9Z0E3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.43■□□□□ 0.38
AireQ9Z0E3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AireQ9Z0E3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AireQ9Z0E3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AireQ9Z0E3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms