Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cr1Q9Z0D9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cr1Q9Z0D9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cx3cr1Q9Z0D9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cx3cr1Q9Z0D9 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.64■□□□□ 0.26
Cx3cr1Q9Z0D9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cx3cr1Q9Z0D9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cx3cr1Q9Z0D9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cx3cr1Q9Z0D9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm10399-202ENSMUST00000202768 748 ntBASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cx3cr1Q9Z0D9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms