Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccr9Q9WUT7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccr9Q9WUT7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr9Q9WUT7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr9Q9WUT7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ccr9Q9WUT7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccr9Q9WUT7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr9Q9WUT7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr9Q9WUT7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccr9Q9WUT7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr9Q9WUT7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr9Q9WUT7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr9Q9WUT7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Ccr9Q9WUT7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.1■□□□□ 0.33
Ccr9Q9WUT7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr9Q9WUT7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr9Q9WUT7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr9Q9WUT7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccr9Q9WUT7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccr9Q9WUT7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccr9Q9WUT7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.08■□□□□ 0.33
Ccr9Q9WUT7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccr9Q9WUT7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccr9Q9WUT7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccr9Q9WUT7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccr9Q9WUT7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccr9Q9WUT7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Ccr9Q9WUT7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.08■□□□□ 0.32
Ccr9Q9WUT7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccr9Q9WUT7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccr9Q9WUT7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccr9Q9WUT7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Gm22238-201ENSMUST00000175222 88 ntBASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Golph3-202ENSMUST00000226517 2359 ntBASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccr9Q9WUT7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccr9Q9WUT7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccr9Q9WUT7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccr9Q9WUT7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccr9Q9WUT7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccr9Q9WUT7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccr9Q9WUT7 Gm9959-201ENSMUST00000068277 390 ntBASIC17.05■□□□□ 0.32
Ccr9Q9WUT7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccr9Q9WUT7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccr9Q9WUT7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccr9Q9WUT7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccr9Q9WUT7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccr9Q9WUT7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Ccr9Q9WUT7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ccr9Q9WUT7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccr9Q9WUT7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccr9Q9WUT7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccr9Q9WUT7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccr9Q9WUT7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.02■□□□□ 0.32
Ccr9Q9WUT7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms