Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atp6ap1Q9R1Q9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Atp6ap1Q9R1Q9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp6ap1Q9R1Q9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp6ap1Q9R1Q9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atp6ap1Q9R1Q9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atp6ap1Q9R1Q9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp6ap1Q9R1Q9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp6ap1Q9R1Q9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp6ap1Q9R1Q9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp6ap1Q9R1Q9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp6ap1Q9R1Q9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.3■□□□□ 0.68
Atp6ap1Q9R1Q9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atp6ap1Q9R1Q9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp6ap1Q9R1Q9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.29■□□□□ 0.68
Atp6ap1Q9R1Q9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Atp6ap1Q9R1Q9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp6ap1Q9R1Q9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp6ap1Q9R1Q9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.27■□□□□ 0.68
Atp6ap1Q9R1Q9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp6ap1Q9R1Q9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Atp6ap1Q9R1Q9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp6ap1Q9R1Q9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp6ap1Q9R1Q9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp6ap1Q9R1Q9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp6ap1Q9R1Q9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Atp6ap1Q9R1Q9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6ap1Q9R1Q9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6ap1Q9R1Q9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6ap1Q9R1Q9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6ap1Q9R1Q9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Atp6ap1Q9R1Q9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6ap1Q9R1Q9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Atp6ap1Q9R1Q9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp6ap1Q9R1Q9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6ap1Q9R1Q9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6ap1Q9R1Q9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp6ap1Q9R1Q9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atp6ap1Q9R1Q9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.24■□□□□ 0.67
Atp6ap1Q9R1Q9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Atp6ap1Q9R1Q9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atp6ap1Q9R1Q9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp6ap1Q9R1Q9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms