Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Serp2-204ENSMUST00000228055 705 ntBASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chrna6Q9R0W9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna6Q9R0W9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna6Q9R0W9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna6Q9R0W9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna6Q9R0W9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
Chrna6Q9R0W9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna6Q9R0W9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna6Q9R0W9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna6Q9R0W9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Chrna6Q9R0W9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Gm26833-201ENSMUST00000180899 440 ntBASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Chrna6Q9R0W9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.02■□□□□ 0.79
Chrna6Q9R0W9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chrna6Q9R0W9 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.01■□□□□ 0.79
Chrna6Q9R0W9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Chrna6Q9R0W9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Chrna6Q9R0W9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chrna6Q9R0W9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chrna6Q9R0W9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.01■□□□□ 0.79
Chrna6Q9R0W9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chrna6Q9R0W9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna6Q9R0W9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Chrna6Q9R0W9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Gm15039-201ENSMUST00000118914 875 ntBASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna6Q9R0W9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna6Q9R0W9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna6Q9R0W9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms