Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Scn11aQ9R053 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Scn11aQ9R053 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC23.83■■□□□ 1.4
Scn11aQ9R053 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Scn11aQ9R053 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn11aQ9R053 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn11aQ9R053 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn11aQ9R053 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Scn11aQ9R053 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC23.82■■□□□ 1.4
Scn11aQ9R053 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.82■■□□□ 1.4
Scn11aQ9R053 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.82■■□□□ 1.4
Scn11aQ9R053 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn11aQ9R053 Reep4-203ENSMUST00000226563 1444 ntBASIC23.82■■□□□ 1.4
Scn11aQ9R053 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn11aQ9R053 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn11aQ9R053 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.81■■□□□ 1.4
Scn11aQ9R053 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.81■■□□□ 1.4
Scn11aQ9R053 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn11aQ9R053 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn11aQ9R053 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn11aQ9R053 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn11aQ9R053 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn11aQ9R053 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn11aQ9R053 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.81■■□□□ 1.4
Scn11aQ9R053 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn11aQ9R053 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.81■■□□□ 1.4
Scn11aQ9R053 Mir7071-201ENSMUST00000184847 69 ntBASIC23.8■■□□□ 1.4
Scn11aQ9R053 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn11aQ9R053 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.8■■□□□ 1.4
Scn11aQ9R053 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn11aQ9R053 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.8■■□□□ 1.4
Scn11aQ9R053 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn11aQ9R053 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn11aQ9R053 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn11aQ9R053 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn11aQ9R053 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn11aQ9R053 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn11aQ9R053 Gm13234-201ENSMUST00000120010 747 ntBASIC23.79■■□□□ 1.4
Scn11aQ9R053 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn11aQ9R053 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.79■■□□□ 1.4
Scn11aQ9R053 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.79■■□□□ 1.4
Scn11aQ9R053 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.79■■□□□ 1.4
Scn11aQ9R053 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.79■■□□□ 1.4
Scn11aQ9R053 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn11aQ9R053 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Scn11aQ9R053 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn11aQ9R053 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn11aQ9R053 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Scn11aQ9R053 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.78■■□□□ 1.4
Scn11aQ9R053 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn11aQ9R053 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.78■■□□□ 1.4
Scn11aQ9R053 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn11aQ9R053 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn11aQ9R053 Gm10653-202ENSMUST00000139570 835 ntBASIC23.78■■□□□ 1.4
Scn11aQ9R053 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.78■■□□□ 1.4
Scn11aQ9R053 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scn11aQ9R053 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scn11aQ9R053 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn11aQ9R053 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn11aQ9R053 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scn11aQ9R053 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn11aQ9R053 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.77■■□□□ 1.4
Scn11aQ9R053 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Scn11aQ9R053 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn11aQ9R053 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn11aQ9R053 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Scn11aQ9R053 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Scn11aQ9R053 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.76■■□□□ 1.39
Scn11aQ9R053 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn11aQ9R053 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.76■■□□□ 1.39
Scn11aQ9R053 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.76■■□□□ 1.39
Scn11aQ9R053 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn11aQ9R053 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.76■■□□□ 1.39
Scn11aQ9R053 Gm12933-201ENSMUST00000120203 872 ntBASIC23.75■■□□□ 1.39
Scn11aQ9R053 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.75■■□□□ 1.39
Scn11aQ9R053 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn11aQ9R053 Gm9988-201ENSMUST00000069786 435 ntBASIC23.75■■□□□ 1.39
Scn11aQ9R053 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn11aQ9R053 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn11aQ9R053 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Scn11aQ9R053 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Scn11aQ9R053 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Scn11aQ9R053 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.75■■□□□ 1.39
Scn11aQ9R053 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn11aQ9R053 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.75■■□□□ 1.39
Scn11aQ9R053 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn11aQ9R053 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.74■■□□□ 1.39
Scn11aQ9R053 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn11aQ9R053 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn11aQ9R053 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn11aQ9R053 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Scn11aQ9R053 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn11aQ9R053 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn11aQ9R053 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Scn11aQ9R053 Gm10252-201ENSMUST00000209541 832 ntBASIC23.73■■□□□ 1.39
Scn11aQ9R053 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Scn11aQ9R053 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.73■■□□□ 1.39
Scn11aQ9R053 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn11aQ9R053 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Scn11aQ9R053 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms