Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx5Q9JL61 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Rfx5Q9JL61 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.98■□□□□ 0.95
Rfx5Q9JL61 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx5Q9JL61 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx5Q9JL61 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.98■□□□□ 0.95
Rfx5Q9JL61 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx5Q9JL61 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.98■□□□□ 0.95
Rfx5Q9JL61 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx5Q9JL61 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx5Q9JL61 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx5Q9JL61 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rfx5Q9JL61 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.96■□□□□ 0.95
Rfx5Q9JL61 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.96■□□□□ 0.95
Rfx5Q9JL61 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Rfx5Q9JL61 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx5Q9JL61 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rfx5Q9JL61 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rfx5Q9JL61 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx5Q9JL61 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx5Q9JL61 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Rfx5Q9JL61 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx5Q9JL61 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx5Q9JL61 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx5Q9JL61 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx5Q9JL61 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx5Q9JL61 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx5Q9JL61 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx5Q9JL61 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx5Q9JL61 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx5Q9JL61 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx5Q9JL61 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rfx5Q9JL61 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx5Q9JL61 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Rfx5Q9JL61 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx5Q9JL61 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx5Q9JL61 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx5Q9JL61 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx5Q9JL61 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.91■□□□□ 0.94
Rfx5Q9JL61 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.91■□□□□ 0.94
Rfx5Q9JL61 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Rfx5Q9JL61 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx5Q9JL61 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.91■□□□□ 0.94
Rfx5Q9JL61 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx5Q9JL61 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx5Q9JL61 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx5Q9JL61 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx5Q9JL61 AA386476-201ENSMUST00000098781 1665 ntBASIC20.9■□□□□ 0.94
Rfx5Q9JL61 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx5Q9JL61 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rfx5Q9JL61 Gm26833-201ENSMUST00000180899 440 ntBASIC20.9■□□□□ 0.94
Rfx5Q9JL61 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.9■□□□□ 0.94
Rfx5Q9JL61 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx5Q9JL61 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx5Q9JL61 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx5Q9JL61 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx5Q9JL61 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rfx5Q9JL61 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.89■□□□□ 0.93
Rfx5Q9JL61 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx5Q9JL61 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rfx5Q9JL61 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx5Q9JL61 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx5Q9JL61 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx5Q9JL61 Gm40848-201ENSMUST00000221998 324 ntBASIC20.88■□□□□ 0.93
Rfx5Q9JL61 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx5Q9JL61 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx5Q9JL61 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx5Q9JL61 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms