Protein–RNA interactions for Protein: Q9JJN2

Zfhx4, Zinc finger homeobox protein 4, mousemouse

Predictions only

Length 3,550 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfhx4Q9JJN2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Gm27275-201ENSMUST00000184318 272 ntBASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Gm6420-201ENSMUST00000193885 723 ntBASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.4■□□□□ 0.54
Zfhx4Q9JJN2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Zfhx4Q9JJN2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Zfhx4Q9JJN2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Zfhx4Q9JJN2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfhx4Q9JJN2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.39■□□□□ 0.53
Zfhx4Q9JJN2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfhx4Q9JJN2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfhx4Q9JJN2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfhx4Q9JJN2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.39■□□□□ 0.53
Zfhx4Q9JJN2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Zfhx4Q9JJN2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Zfhx4Q9JJN2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.38■□□□□ 0.53
Zfhx4Q9JJN2 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.38■□□□□ 0.53
Zfhx4Q9JJN2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfhx4Q9JJN2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.38■□□□□ 0.53
Zfhx4Q9JJN2 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 Gm10819-201ENSMUST00000099988 561 ntBASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 Gm13146-201ENSMUST00000118508 780 ntBASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Zfhx4Q9JJN2 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.36■□□□□ 0.53
Zfhx4Q9JJN2 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.36■□□□□ 0.53
Zfhx4Q9JJN2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zfhx4Q9JJN2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zfhx4Q9JJN2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zfhx4Q9JJN2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.36■□□□□ 0.53
Zfhx4Q9JJN2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zfhx4Q9JJN2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Zfhx4Q9JJN2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfhx4Q9JJN2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Gm6211-202ENSMUST00000167849 925 ntBASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zfhx4Q9JJN2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Zfhx4Q9JJN2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zfhx4Q9JJN2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zfhx4Q9JJN2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zfhx4Q9JJN2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.33■□□□□ 0.52
Zfhx4Q9JJN2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zfhx4Q9JJN2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zfhx4Q9JJN2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.32■□□□□ 0.52
Zfhx4Q9JJN2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.31■□□□□ 0.52
Zfhx4Q9JJN2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Zfhx4Q9JJN2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zfhx4Q9JJN2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.31■□□□□ 0.52
Zfhx4Q9JJN2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zfhx4Q9JJN2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.31■□□□□ 0.52
Zfhx4Q9JJN2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zfhx4Q9JJN2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zfhx4Q9JJN2 Gm5643-201ENSMUST00000117081 966 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms