Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herpud2Q9JJC9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Herpud2Q9JJC9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herpud2Q9JJC9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herpud2Q9JJC9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herpud2Q9JJC9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Herpud2Q9JJC9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.75■□□□□ 0.75
Herpud2Q9JJC9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Herpud2Q9JJC9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Herpud2Q9JJC9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Herpud2Q9JJC9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.74■□□□□ 0.75
Herpud2Q9JJC9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.74■□□□□ 0.75
Herpud2Q9JJC9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Herpud2Q9JJC9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Herpud2Q9JJC9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.74■□□□□ 0.75
Herpud2Q9JJC9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Herpud2Q9JJC9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Herpud2Q9JJC9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Herpud2Q9JJC9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herpud2Q9JJC9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Herpud2Q9JJC9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herpud2Q9JJC9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herpud2Q9JJC9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Herpud2Q9JJC9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Herpud2Q9JJC9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herpud2Q9JJC9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud2Q9JJC9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud2Q9JJC9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.72■□□□□ 0.75
Herpud2Q9JJC9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud2Q9JJC9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud2Q9JJC9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud2Q9JJC9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud2Q9JJC9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud2Q9JJC9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Herpud2Q9JJC9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Herpud2Q9JJC9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.7■□□□□ 0.74
Herpud2Q9JJC9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Herpud2Q9JJC9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Herpud2Q9JJC9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Gm12933-201ENSMUST00000120203 872 ntBASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herpud2Q9JJC9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herpud2Q9JJC9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Herpud2Q9JJC9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Herpud2Q9JJC9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.67■□□□□ 0.74
Herpud2Q9JJC9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herpud2Q9JJC9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Herpud2Q9JJC9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.66■□□□□ 0.74
Herpud2Q9JJC9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herpud2Q9JJC9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herpud2Q9JJC9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herpud2Q9JJC9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herpud2Q9JJC9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Herpud2Q9JJC9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms