Protein–RNA interactions for Protein: Q9JIW5

Smad9, Mothers against decapentaplegic homolog 9, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad9Q9JIW5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smad9Q9JIW5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Smad9Q9JIW5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad9Q9JIW5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Smad9Q9JIW5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smad9Q9JIW5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.68■□□□□ 0.74
Smad9Q9JIW5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smad9Q9JIW5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smad9Q9JIW5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.68■□□□□ 0.74
Smad9Q9JIW5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad9Q9JIW5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad9Q9JIW5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad9Q9JIW5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad9Q9JIW5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smad9Q9JIW5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad9Q9JIW5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smad9Q9JIW5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smad9Q9JIW5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Smad9Q9JIW5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smad9Q9JIW5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad9Q9JIW5 Gm43137-201ENSMUST00000198052 594 ntBASIC19.64■□□□□ 0.73
Smad9Q9JIW5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad9Q9JIW5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad9Q9JIW5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Smad9Q9JIW5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad9Q9JIW5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad9Q9JIW5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad9Q9JIW5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad9Q9JIW5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad9Q9JIW5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad9Q9JIW5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smad9Q9JIW5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.62■□□□□ 0.73
Smad9Q9JIW5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smad9Q9JIW5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.62■□□□□ 0.73
Smad9Q9JIW5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smad9Q9JIW5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad9Q9JIW5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad9Q9JIW5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad9Q9JIW5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smad9Q9JIW5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms