Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ap3s1Q9DCR2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ap3s1Q9DCR2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ap3s1Q9DCR2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ap3s1Q9DCR2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ap3s1Q9DCR2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.55■□□□□ 0.4
Ap3s1Q9DCR2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ap3s1Q9DCR2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ap3s1Q9DCR2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
Ap3s1Q9DCR2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ap3s1Q9DCR2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ap3s1Q9DCR2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
Ap3s1Q9DCR2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ap3s1Q9DCR2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Ap3s1Q9DCR2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ap3s1Q9DCR2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ap3s1Q9DCR2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ap3s1Q9DCR2 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.52■□□□□ 0.4
Ap3s1Q9DCR2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ap3s1Q9DCR2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ap3s1Q9DCR2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ap3s1Q9DCR2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ap3s1Q9DCR2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ap3s1Q9DCR2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ap3s1Q9DCR2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ap3s1Q9DCR2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ap3s1Q9DCR2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Gm6311-201ENSMUST00000073790 878 ntBASIC17.49■□□□□ 0.39
Ap3s1Q9DCR2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms