Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rrp8Q9DB85 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rrp8Q9DB85 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rrp8Q9DB85 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rrp8Q9DB85 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp8Q9DB85 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rrp8Q9DB85 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp8Q9DB85 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp8Q9DB85 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rrp8Q9DB85 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rrp8Q9DB85 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rrp8Q9DB85 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rrp8Q9DB85 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rrp8Q9DB85 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rrp8Q9DB85 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rrp8Q9DB85 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.33■□□□□ 0.68
Rrp8Q9DB85 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rrp8Q9DB85 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp8Q9DB85 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp8Q9DB85 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp8Q9DB85 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp8Q9DB85 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.32■□□□□ 0.68
Rrp8Q9DB85 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp8Q9DB85 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rrp8Q9DB85 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp8Q9DB85 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Mir5133-201ENSMUST00000174955 77 ntBASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp8Q9DB85 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms