Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Gm8493-201ENSMUST00000196881 489 ntBASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem54Q9D7S1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem54Q9D7S1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.32■□□□□ 0.36
Tmem54Q9D7S1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem54Q9D7S1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.32■□□□□ 0.36
Tmem54Q9D7S1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem54Q9D7S1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem54Q9D7S1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem54Q9D7S1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem54Q9D7S1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tmem54Q9D7S1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tmem54Q9D7S1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tmem54Q9D7S1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem54Q9D7S1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem54Q9D7S1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tmem54Q9D7S1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem54Q9D7S1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem54Q9D7S1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem54Q9D7S1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Tmem54Q9D7S1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem54Q9D7S1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem54Q9D7S1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.29■□□□□ 0.36
Tmem54Q9D7S1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem54Q9D7S1 Gm43173-201ENSMUST00000202246 593 ntBASIC17.29■□□□□ 0.36
Tmem54Q9D7S1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.29■□□□□ 0.36
Tmem54Q9D7S1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem54Q9D7S1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.29■□□□□ 0.36
Tmem54Q9D7S1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem54Q9D7S1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem54Q9D7S1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmem54Q9D7S1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tmem54Q9D7S1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmem54Q9D7S1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tmem54Q9D7S1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Tmem54Q9D7S1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem54Q9D7S1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem54Q9D7S1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem54Q9D7S1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Tmem54Q9D7S1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem54Q9D7S1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem54Q9D7S1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem54Q9D7S1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tmem54Q9D7S1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tmem54Q9D7S1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms