Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm10698-201ENSMUST00000182663 604 ntBASIC21.57■■□□□ 1.04
Lysmd1Q9D0E3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd1Q9D0E3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd1Q9D0E3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd1Q9D0E3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
Lysmd1Q9D0E3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd1Q9D0E3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd1Q9D0E3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd1Q9D0E3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lysmd1Q9D0E3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Lysmd1Q9D0E3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Lysmd1Q9D0E3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.54■■□□□ 1.04
Lysmd1Q9D0E3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Lysmd1Q9D0E3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Lysmd1Q9D0E3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lysmd1Q9D0E3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Lysmd1Q9D0E3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.53■■□□□ 1.04
Lysmd1Q9D0E3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.53■■□□□ 1.04
Lysmd1Q9D0E3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd1Q9D0E3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd1Q9D0E3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd1Q9D0E3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd1Q9D0E3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Lysmd1Q9D0E3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lysmd1Q9D0E3 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.52■■□□□ 1.04
Lysmd1Q9D0E3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lysmd1Q9D0E3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.52■■□□□ 1.04
Lysmd1Q9D0E3 Gm13534-201ENSMUST00000121169 513 ntBASIC21.52■■□□□ 1.04
Lysmd1Q9D0E3 Gm38205-201ENSMUST00000192243 258 ntBASIC21.52■■□□□ 1.04
Lysmd1Q9D0E3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lysmd1Q9D0E3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Lysmd1Q9D0E3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Lysmd1Q9D0E3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
Lysmd1Q9D0E3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd1Q9D0E3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd1Q9D0E3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd1Q9D0E3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd1Q9D0E3 Gm2559-201ENSMUST00000201323 363 ntBASIC21.51■■□□□ 1.03
Lysmd1Q9D0E3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.5■■□□□ 1.03
Lysmd1Q9D0E3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd1Q9D0E3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Lysmd1Q9D0E3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd1Q9D0E3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd1Q9D0E3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd1Q9D0E3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Lysmd1Q9D0E3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd1Q9D0E3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd1Q9D0E3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lysmd1Q9D0E3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lysmd1Q9D0E3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lysmd1Q9D0E3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lysmd1Q9D0E3 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.48■■□□□ 1.03
Lysmd1Q9D0E3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lysmd1Q9D0E3 Gm18666-201ENSMUST00000190039 958 ntBASIC21.48■■□□□ 1.03
Lysmd1Q9D0E3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lysmd1Q9D0E3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.48■■□□□ 1.03
Lysmd1Q9D0E3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lysmd1Q9D0E3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lysmd1Q9D0E3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Lysmd1Q9D0E3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.47■■□□□ 1.03
Lysmd1Q9D0E3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.47■■□□□ 1.03
Lysmd1Q9D0E3 Gm6659-201ENSMUST00000174752 547 ntBASIC21.47■■□□□ 1.03
Lysmd1Q9D0E3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lysmd1Q9D0E3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lysmd1Q9D0E3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lysmd1Q9D0E3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Lysmd1Q9D0E3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Lysmd1Q9D0E3 Gm15378-201ENSMUST00000121894 207 ntBASIC21.45■■□□□ 1.02
Lysmd1Q9D0E3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lysmd1Q9D0E3 Gm5417-201ENSMUST00000079706 384 ntBASIC21.45■■□□□ 1.02
Lysmd1Q9D0E3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.45■■□□□ 1.02
Lysmd1Q9D0E3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms