Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Raet1eQ9CZQ6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1eQ9CZQ6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Raet1eQ9CZQ6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1eQ9CZQ6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1eQ9CZQ6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1eQ9CZQ6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1eQ9CZQ6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1eQ9CZQ6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1eQ9CZQ6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1eQ9CZQ6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1eQ9CZQ6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Raet1eQ9CZQ6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1eQ9CZQ6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1eQ9CZQ6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1eQ9CZQ6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Raet1eQ9CZQ6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1eQ9CZQ6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1eQ9CZQ6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Raet1eQ9CZQ6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1eQ9CZQ6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1eQ9CZQ6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Raet1eQ9CZQ6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Raet1eQ9CZQ6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Raet1eQ9CZQ6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Raet1eQ9CZQ6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Gm7332-201ENSMUST00000118351 454 ntBASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Gm27502-201ENSMUST00000183495 199 ntBASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Raet1eQ9CZQ6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms