Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ddx47Q9CWX9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx47Q9CWX9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.27■□□□□ 0.84
Ddx47Q9CWX9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx47Q9CWX9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ddx47Q9CWX9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx47Q9CWX9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx47Q9CWX9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx47Q9CWX9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.26■□□□□ 0.83
Ddx47Q9CWX9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.25■□□□□ 0.83
Ddx47Q9CWX9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx47Q9CWX9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx47Q9CWX9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx47Q9CWX9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx47Q9CWX9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx47Q9CWX9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx47Q9CWX9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx47Q9CWX9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx47Q9CWX9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx47Q9CWX9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ddx47Q9CWX9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ddx47Q9CWX9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ddx47Q9CWX9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Ddx47Q9CWX9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Rarb-207ENSMUST00000225921 2756 ntBASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx47Q9CWX9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx47Q9CWX9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms