Protein–RNA interactions for Protein: Q9CWV7

Zswim1, Zinc finger SWIM domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim1Q9CWV7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Zswim1Q9CWV7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim1Q9CWV7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim1Q9CWV7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Zswim1Q9CWV7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.17■□□□□ 0.66
Zswim1Q9CWV7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.17■□□□□ 0.66
Zswim1Q9CWV7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim1Q9CWV7 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.17■□□□□ 0.66
Zswim1Q9CWV7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim1Q9CWV7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim1Q9CWV7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.17■□□□□ 0.66
Zswim1Q9CWV7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Gm43530-201ENSMUST00000195920 274 ntBASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Zswim1Q9CWV7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Zswim1Q9CWV7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zswim1Q9CWV7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Gm8493-201ENSMUST00000196881 489 ntBASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zswim1Q9CWV7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zswim1Q9CWV7 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.13■□□□□ 0.65
Zswim1Q9CWV7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Zswim1Q9CWV7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zswim1Q9CWV7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zswim1Q9CWV7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Gm43017-201ENSMUST00000198296 752 ntBASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Zswim1Q9CWV7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Zswim1Q9CWV7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Zswim1Q9CWV7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Zswim1Q9CWV7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Zswim1Q9CWV7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.11■□□□□ 0.65
Zswim1Q9CWV7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.11■□□□□ 0.65
Zswim1Q9CWV7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zswim1Q9CWV7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms