Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Rnf135Q9CWS1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rnf135Q9CWS1 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.52■□□□□ 0.88
Rnf135Q9CWS1 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.52■□□□□ 0.88
Rnf135Q9CWS1 Gm9870-201ENSMUST00000063874 645 ntBASIC20.52■□□□□ 0.88
Rnf135Q9CWS1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf135Q9CWS1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Rnf135Q9CWS1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf135Q9CWS1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf135Q9CWS1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Serp2-204ENSMUST00000228055 705 ntBASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf135Q9CWS1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rnf135Q9CWS1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf135Q9CWS1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Gm12821-201ENSMUST00000120022 600 ntBASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Gm43530-201ENSMUST00000195920 274 ntBASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf135Q9CWS1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf135Q9CWS1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rnf135Q9CWS1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf135Q9CWS1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf135Q9CWS1 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.47■□□□□ 0.87
Rnf135Q9CWS1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf135Q9CWS1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf135Q9CWS1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Mir6236-201ENSMUST00000184437 123 ntBASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf135Q9CWS1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Rnf135Q9CWS1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf135Q9CWS1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf135Q9CWS1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf135Q9CWS1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.45■□□□□ 0.86
Rnf135Q9CWS1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rnf135Q9CWS1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf135Q9CWS1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf135Q9CWS1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf135Q9CWS1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rnf135Q9CWS1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Rnf135Q9CWS1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf135Q9CWS1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.44■□□□□ 0.86
Rnf135Q9CWS1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf135Q9CWS1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf135Q9CWS1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rnf135Q9CWS1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf135Q9CWS1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Rnf135Q9CWS1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rnf135Q9CWS1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Rnf135Q9CWS1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf135Q9CWS1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf135Q9CWS1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf135Q9CWS1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf135Q9CWS1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms