Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg3Q9CQV4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Retreg3Q9CQV4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg3Q9CQV4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Retreg3Q9CQV4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Retreg3Q9CQV4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg3Q9CQV4 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.85■□□□□ 0.77
Retreg3Q9CQV4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg3Q9CQV4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg3Q9CQV4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg3Q9CQV4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg3Q9CQV4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg3Q9CQV4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg3Q9CQV4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg3Q9CQV4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg3Q9CQV4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.83■□□□□ 0.77
Retreg3Q9CQV4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Retreg3Q9CQV4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retreg3Q9CQV4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retreg3Q9CQV4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg3Q9CQV4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 Spcs1-204ENSMUST00000226782 949 ntBASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg3Q9CQV4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg3Q9CQV4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Mir7075-201ENSMUST00000184187 82 ntBASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg3Q9CQV4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.77■□□□□ 0.76
Retreg3Q9CQV4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Retreg3Q9CQV4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retreg3Q9CQV4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retreg3Q9CQV4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Retreg3Q9CQV4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retreg3Q9CQV4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg3Q9CQV4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms