Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim34aQ99PP6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim34aQ99PP6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trim34aQ99PP6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.45■■□□□ 1.5
Trim34aQ99PP6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim34aQ99PP6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim34aQ99PP6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim34aQ99PP6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim34aQ99PP6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim34aQ99PP6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim34aQ99PP6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim34aQ99PP6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trim34aQ99PP6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.43■■□□□ 1.5
Trim34aQ99PP6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim34aQ99PP6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
Trim34aQ99PP6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trim34aQ99PP6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trim34aQ99PP6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim34aQ99PP6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim34aQ99PP6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC24.43■■□□□ 1.5
Trim34aQ99PP6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim34aQ99PP6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Trim34aQ99PP6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim34aQ99PP6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24.42■■□□□ 1.5
Trim34aQ99PP6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Trim34aQ99PP6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Trim34aQ99PP6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim34aQ99PP6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim34aQ99PP6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim34aQ99PP6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
Trim34aQ99PP6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Trim34aQ99PP6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trim34aQ99PP6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim34aQ99PP6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim34aQ99PP6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim34aQ99PP6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Trim34aQ99PP6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Trim34aQ99PP6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Trim34aQ99PP6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC24.39■■□□□ 1.49
Trim34aQ99PP6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim34aQ99PP6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC24.39■■□□□ 1.49
Trim34aQ99PP6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim34aQ99PP6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim34aQ99PP6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Trim34aQ99PP6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim34aQ99PP6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim34aQ99PP6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Trim34aQ99PP6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Trim34aQ99PP6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.38■■□□□ 1.49
Trim34aQ99PP6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim34aQ99PP6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Trim34aQ99PP6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Trim34aQ99PP6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC24.37■■□□□ 1.49
Trim34aQ99PP6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trim34aQ99PP6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim34aQ99PP6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim34aQ99PP6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim34aQ99PP6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim34aQ99PP6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Gm12669-201ENSMUST00000122162 1009 ntBASIC24.36■■□□□ 1.49
Trim34aQ99PP6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim34aQ99PP6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34aQ99PP6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Trim34aQ99PP6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC24.35■■□□□ 1.49
Trim34aQ99PP6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34aQ99PP6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34aQ99PP6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34aQ99PP6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34aQ99PP6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim34aQ99PP6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34aQ99PP6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim34aQ99PP6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms