Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn4rQ99PI8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn4rQ99PI8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtn4rQ99PI8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtn4rQ99PI8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Rtn4rQ99PI8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rtn4rQ99PI8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Gm43173-201ENSMUST00000202246 593 ntBASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.39■□□□□ 0.37
Rtn4rQ99PI8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Gm8493-201ENSMUST00000196881 489 ntBASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Serp2-204ENSMUST00000228055 705 ntBASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4rQ99PI8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4rQ99PI8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.37■□□□□ 0.37
Rtn4rQ99PI8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rtn4rQ99PI8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4rQ99PI8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4rQ99PI8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4rQ99PI8 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.37■□□□□ 0.37
Rtn4rQ99PI8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4rQ99PI8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4rQ99PI8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtn4rQ99PI8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.36■□□□□ 0.37
Rtn4rQ99PI8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtn4rQ99PI8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtn4rQ99PI8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtn4rQ99PI8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtn4rQ99PI8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
Rtn4rQ99PI8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtn4rQ99PI8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rtn4rQ99PI8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rtn4rQ99PI8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Gm43017-201ENSMUST00000198296 752 ntBASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4rQ99PI8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn4rQ99PI8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rtn4rQ99PI8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn4rQ99PI8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn4rQ99PI8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms