Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tlr3Q99MB1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tlr3Q99MB1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tlr3Q99MB1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tlr3Q99MB1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.17■□□□□ 0.98
Tlr3Q99MB1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tlr3Q99MB1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Tlr3Q99MB1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tlr3Q99MB1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.17■□□□□ 0.98
Tlr3Q99MB1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tlr3Q99MB1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tlr3Q99MB1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tlr3Q99MB1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tlr3Q99MB1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tlr3Q99MB1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tlr3Q99MB1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tlr3Q99MB1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tlr3Q99MB1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.15■□□□□ 0.98
Tlr3Q99MB1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tlr3Q99MB1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tlr3Q99MB1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tlr3Q99MB1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Tlr3Q99MB1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tlr3Q99MB1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tlr3Q99MB1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tlr3Q99MB1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tlr3Q99MB1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Tlr3Q99MB1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tlr3Q99MB1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.14■□□□□ 0.97
Tlr3Q99MB1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tlr3Q99MB1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tlr3Q99MB1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tlr3Q99MB1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tlr3Q99MB1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tlr3Q99MB1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.13■□□□□ 0.97
Tlr3Q99MB1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tlr3Q99MB1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tlr3Q99MB1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tlr3Q99MB1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tlr3Q99MB1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tlr3Q99MB1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tlr3Q99MB1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tlr3Q99MB1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tlr3Q99MB1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tlr3Q99MB1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Tlr3Q99MB1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tlr3Q99MB1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Tlr3Q99MB1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tlr3Q99MB1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms